source:
http://cmdlinetips.com/2012/05/how-to-install-a-r-package-locally-and-load-it-easily/
R has been one of the popular languages for anything to do with large amount of data. There are loads of useful packages that let you get started immediately in using a wide realm of statistical/computational tools. Installing an R package is easy. Typically, R Packages can be downloaded as “tar.gz” file for Mac OS X from CRAN sources. The command to install a R package to all users in your machine is
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R CMD INSTALL -l myRPackage.tar.gz
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Local Installation of R Packages
Sometimes you might want to install a R package locally, either because you may not have root access to install a package globally or you may just want to try out a new package before installing globally. Here is how to install a R package locally from the terminal.
To install a R package locally, specify the local directory where you want to install by using the “-l” option in the “
R CMD INSTALL” command. For example, to install the R package in the local directory “/usr/me/localR/library”, use the “R CMD INSTALL” as follows.
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R CMD INSTALL -l /usr/me/localR/library myRPackage.tar.gz
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How to Load a Locally Installed R Package and Use it?
Installing R Packages at a local directory is only a first step. There are a few ways to load the locally installed R packages and use them. One option is to specify the local path to the R package while loading the library. The R command to load a general package is
To load a locally installed R package, use the library command with parameter
lib.loc as
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library("myRPackage", lib.loc="/usr/me/local/R/library")
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Another option is to instruct your
.bashrc file to add the the path to local R library. This option lets you load the package without specifying the local every time. To enable this add the following to your
.bashrc
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if [ -n $R_LIBS ]; then
export R_LIBS=/usr/me/local/R/library:$R_LIBS
else
export R_LIBS=/usr/me/local/R/library
fi
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After adding you can check if the local R package directory in the R library path using the R command “
.libPaths()“. Typing “
.libPaths()” in R, will show all the R library paths. If your local R library path is not added properly, you will only see one general path to R library, like
“/opt/R/2.11.1/lib64/R/library”.
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